Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNVVVLGTQWGDEGKGKIVDLLTDQAAAVVRYQGGHNAGHTLVVGGKKTVLHLIPSGILREKVLCLIGNGVVLSPAALIEEMGILEAEGVP-VKERLRISPNCPLILPNHIALDQAREKKRG---NAKIGTTGRGIGPAYEDKVARRAVRVADLVRGGAALEEKLTEMLELHNFQLTQFYGVEAVKFEDVLALCNQWREVLAPLVIDVTKVLHD-YRKEGKAVMFEGAQGSLLDIDHGTYPYVTSSNTTAGGVSSGSGMGPLHLDYVLGITKAYTTRVGAGPFPTELVYDAASDSGDPIGKHLGTVGHEFGASTGRQRRCGWFDAEILRRSVDVNSLSGICLTKLDVLDGLEEVKICVGYE-NTDSGCVGSSDAVSFECLKPIYETMPGWSESTVGLTSIDQLPANALAYVKRIEQLIECPIDIVSTGPDRAETIILRHPFSA
1MF0 Chain:A ((35-456))-----VVLGAQWGDEGKGKVVDLLATDADIVSRCQGGNNAGHTVVVDGKEYDFHLLPSGIINTKAVSFIGNGVVIHLPGLFEEAEKNEKKGLKDWEKRLIISDRAHLVFDFHQAVDGLQEVQRQAQEGKNIGTTKKGIGPTYSSKAARTGLRICDLLSDFDEFSARFKNLAHQHQ---SMFPTLE-IDVEGQLKRLKGFAERIRPMVRDGVYFMYEALHGPPKKVLVEGANAALLDIDFGTYPFVTSSNCTVGGVCTGLGIPPQNIGDVYGVVKAYTTRVGIGAFPTEQI--------NEIGDLLQNRGHEWGVTTGRKRRCGWLDLMILRYAHMVNGFTALALTKLDILDVLSEIKVGISYKLNGKRIPYFPANQEILQKVEVEYETLPGWKADTTGARKWEDLPPQAQSYVRFVENHMGVAVKWVGVGKSRESMIQL------


General information:
TITO was launched using:
RESULT:

Template: 1MF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2444 -48318 -19.77 -116.15
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -19.77
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_1MF0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MF0-query.scw
PDB file : Tito_Scwrl_1MF0.pdb: