Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLINTEVKPFQATAYHNGQFIEVNETNLKGKWSVVFFYPADFTFVCPTELEDLADNYAEFQKLGVEIYGVSTDTHFTHKAWHDTSDAIKKIQYPLIGDPTWTLSKNFDVLIESEGLADRGTFVIDPEGKIQIVEINAGGIGRDASELLRKVKAAQYVHSHPGEVCPAKWKEGEATLAPSIDLVGKI
4MA9 Chain:D ((1-186))-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPSLDLVGKI


General information:
TITO was launched using:
RESULT:

Template: 4MA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 871 -88353 -101.44 -475.02
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.94

3D Compatibility (PKB) : -101.44
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_4MA9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MA9-query.scw
PDB file : Tito_Scwrl_4MA9.pdb: