Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLAN----PQ-TTHAAIAVPTSTVI------H-------KTIEMDADMSDD--EREVQIRVDAEQY-----IPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLELADLNPKLADVESYAVERTFSVFADSLPIGAN-TIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEEASRAKKDRSLP------------------------DDYEIEVLDPFLDAVVQQAARSLQFFFSSS----QFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFLQMGFSPQVDVQKIENDASSLMVACGLALRSFD
4A2B Chain:A ((11-392))TSIDIGSRYIKGLVLGKRDQEWEALAFSSV--KSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDI-LSEMQSEALEKLKENGKTPLHIFSKRYLLDDERIVFNPLDMKAS-KIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-----KDRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDVSAVLDTSFEESERLIITHGNAVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANS-DRPSIINAD-EVANDPSFAAAFGNVFAVS-


General information:
TITO was launched using:
RESULT:

Template: 4A2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1569 8045 5.13 24.53
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 5.13
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_4A2B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A2B-query.scw
PDB file : Tito_Scwrl_4A2B.pdb: