Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKQIGVLQMRMNVESFNLDHTKVKAPYVRVADRKTGAHGDVIIKYDVRFKQPNKEHMDMPSLHSLEHLTAELIRNHADYI-VDWSPMGCQTGFYLTVLNHESYEDILDVLEATMKDVLEATEVPASNETQCGWAASHTLEGAQALAREFLAKRDEWSEVEA
4U3D Chain:A ((66-91))-----------------------------------------------------------GQRIKTVEHILSVLHLLEITNVTIEV-----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4U3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 16 -2114 -132.13 -84.56
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -132.13
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.649

(partial model without unconserved sides chains):
PDB file : Tito_4U3D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U3D-query.scw
PDB file : Tito_Scwrl_4U3D.pdb: