Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MLYDL-----------------------LQTKHIYIVCGKTDLRKGID-GLASLIQQEYQL--ELYEDAVFLFCGNRQDRFKLLYWDGDGFLL--CYKRIENGKLKWPRTKDEVRTLTNQP-----VKWLLEGLSIDQPRAILPGKKGVF-----------------------
1Z8K Chain:A ((20-193))KVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFG----DYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN


General information:
TITO was launched using:
RESULT:

Template: 1Z8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 474 5930 12.51 52.47
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 12.51
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.138

(partial model without unconserved sides chains):
PDB file : Tito_1Z8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z8K-query.scw
PDB file : Tito_Scwrl_1Z8K.pdb: