Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNLLTAEKIKVWKSRKMWVSLGLMVVLPLFYSWNEWYMHTKYGNELNQATDTVINGATGILMVEKMAAWILLAFAAFACFYIGEEFQNGTIRNTLSLGRNRMTYYVSKLLVTLLITTL-GVVLITGLAMIAYTLAFGFGEVEGIKNYGNYVLKVFPVLLLLILATLSVPVALTFITRSTSVSLLLSFLYIMGTAFVPGVFAKIKGLEFLTEWFTETWLMYTDFAQQATYSQAPKMIL-VSLVTIVVSSALGMFIFQKSDIK--------
1Q3K Chain:A ((1-259))-SKSVFVGELTWKEYEARVAAGDCVLMLPV-------GALEQHGHHMCMNVDVLLPTAVCQRVAERIGA-LVLPGLQYGYKSQQKSGGGNHFPGTTSLDGATLTGTVQDIIRELARHGVRRLVLMNGHYENSMFIVEGIDLALRELRYAGI--HDFKVVVLSYWDFVKDPAVIQRLYPEGFLGWDIEHGGVFETSLMLALYPDLVDLERVVDHPPATFPPYDVFPVDPARTPAPGTLSSAKTASREKGELILEVCVQGIADAIGQEFPPT


General information:
TITO was launched using:
RESULT:

Template: 1Q3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1353 -153769 -113.65 -617.54
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -113.65
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_1Q3K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q3K-query.scw
PDB file : Tito_Scwrl_1Q3K.pdb: