Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLK----MRLKHIILTTCLCSTLAMAELPQDSRRPGGI-------AVIPLTSDITQVTF---QHKPVLISQEGQQRYAVFG-IPLSTPLGSVQLETNKAPIQIEVKS---YPYAEQRLKVTNQDYVNPNQSQLDRYAQEAKEQNDVYSSFTQ--------SSWQALPKFIRPTSGKFTNSFGRKR-----------------FFNGEERAPHSGLDIPAPIGQKVVAPADGVVVQTGHYFFNGQTVLIDHGQGLISMFCHLSEIR--VEKGQHIRQGETLGLVGKTGRVTGPHLHWGMSLNNARVDPQLFLTTTH------------------------------------------------
4RNZ Chain:A ((1-369))MERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNE-LRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTG----PHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH


General information:
TITO was launched using:
RESULT:

Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1152 22344 19.40 84.00
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 19.40
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.278

(partial model without unconserved sides chains):
PDB file : Tito_4RNZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RNZ-query.scw
PDB file : Tito_Scwrl_4RNZ.pdb: