Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIFSTNTCPVPNDLESVIHHKDEVPAELCGMSEQQVQKIWKSIESLYKTGNYPLITFCLRRQGKILLNRSIGYAQGNSPAGLQENALIATPDTPVCLFSASKMITAMLIHLLDEKGEINLLDPVSYYIPEYGVNGKRRATIFHLLSHRGGIPYVDGDVTPELLFDKDEILRRLYAARPVSPAGNHLAYHAVTAGY-ILGEIIERVTGQDLRKFVHETIEKPMDMPYFNYGLKPEYRAEVALNCATGLHPRL--GTDHYLNHVLGGGL-QLAV-DVTNDSRFMDTICPAGNIYTSAEQAGRFFEMLLSGG--SYQGKQILSEKTIFRATLPTTGVNIDRTLLIPMRYALGPMLGSNPVGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTTGKSVVGTHLPALANLLYQISIQCPRIPRDQRRSLFGSDSHETDLV
3ZYT Chain:A ((5-368))-------------------------------VIAPGFEPVAELFGVFLEQDPDYSAQVAAYHRGVKVLDLSG--------------GPHIRPDSVTGVFSCSKGMAGLVMALLVQDGELDLEAEVVKYWPEFGVEGKSSITVAQLLSHRAGLLGVEGGLTLHEVNNSELAAAKLAELPPLWKPGTAFGYHALTI-GIFMEELCRRITGSTLQEVFEQRIRAVTGANFYLGLPE-SEESRFAQFRWAADPSWPWVDPASHFGL--AANAAVGDILDLPNIREVRAAGLSSAAGVASAEGMARIYAAALTGLEGKSAMPPLLTEETIRTVSAEQVFGI-DRVFGETGCFGTVFMKSHTRM---PFGSYRAFGHDGASASLGFADPVYELGFGYVPQTAEPGGV-GCRNFQLSSAVREVIA---------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2248 -132543 -58.96 -371.27
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -58.96
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_3ZYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZYT-query.scw
PDB file : Tito_Scwrl_3ZYT.pdb: