Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRIALLDYGMGNLHSAAKALEYVGATVDVT--NDP--KLIAQADKIVFPGVGAMRDCMQGMREAGIDEVVRK-AAFNKPVLAICVGMQALLQSSEENGGVDALGIFDGVVKHFPQMEGLKVPHMGWNQVHQMDPSHPMWNNIEQDARFYFVHSYYVEPKDE-NLVAATCEYGVNFCTAI-HKDNLFATQFHPEKSHTAGLQLLKNFVEWNI
1GPW Chain:F ((1-198))-MRIGIISVGPGNIMNLYRGVKRASENFEDVSIELVESPRNDLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKLRS---RRLPHMGWNEVIFKD----TF----PNGYYYFVHTYRA--VCEEEHVLGTTEYDGEIFPSAVRKGRILGFQFHPEKSSKIGRKLLEKVIECSL


General information:
TITO was launched using:
RESULT:

Template: 1GPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1082 -4366 -4.03 -22.86
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain F : 0.76

3D Compatibility (PKB) : -4.03
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_1GPW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GPW-query.scw
PDB file : Tito_Scwrl_1GPW.pdb: