Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQTPEALTTEQFKQAIIDKG-QYYH--I-YHPFHVMMYEGKATQQQIQAWVANRYYYQINIPLKDAAIMANCPD--QRVRQEWIQRMIDQDGEYPDGGGREAWLRLAEAVGLSREQVISEELVLPGVRFAVDAYVNFARRASWREAASSSL-TELFAPQIHQSRLESWPQHYPWIDDKGYEYFRSRLSQARRDVEHGLTITLDSFTTHEQQQRMLEILQFKLDILWSILDALTLAYVHNEAPYHSVTQERVWHKGLFK
3DDE Chain:A ((4-226))----------IIDLTKLEQKVATMWDSILTNSPFIHEVLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCFHHAHEEA------GHELMALSDIASIGFDREDVLSS-KPLPATETLIAYLYWISATGNPVQRLGYSYWAENVYGYI-DPVLKAIQSTLD-LTPQSMKFFIAHSKIDAKHAEEVNEMLHEVCKTQEDVDSVVAVMENSLVLTARILDDVWKEYQLFQS-----------------


General information:
TITO was launched using:
RESULT:

Template: 3DDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 934 -21054 -22.54 -97.47
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -22.54
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_3DDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DDE-query.scw
PDB file : Tito_Scwrl_3DDE.pdb: