Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MFFLTKFVKPMQPYILVLYYSKYGSTKEMAHLIANGVESA-GMNVKIRTVPNIATVVTEAEPSIPEEGDIYCTLEELANCAGLALGSPTRFGNMASEMKYFWDQTTNLWLNGALHNKPACVFTSSGSMHGGQESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPYGASHVSGPRHDQSLSQDEKNLCEAQGKRLGEIVKKLYS 4DY4 Chain:C ((3-195)) --------------VLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGT-GGGQEQTITSTWTTLAHHGMVIVPIGYA-----------TPYGATTIAGG----QPSQEELSIARYQGEYVAGLAVKL--

General information: TITO was launched using: RESULT: Template: 4DY4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 969 -34800 -35.91 -198.85 target 2D structure prediction score : 0.65 Monomeric hydrophicity matching model chain C : 0.77 3D Compatibility (PKB) : -35.91 2D Compatibility (Sec. Struct. Predict.) : 0.65 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.398

(partial model without unconserved sides chains): PDB file : Tito_4DY4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4DY4-query.scw PDB file : Tito_Scwrl_4DY4.pdb: