Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSQPLLDCWNLDQILDDLNAHGFAIVNQAYS-AEYHTQVAKECSHHFDEFREAGIQNGVVSTIRSDHILWINESLPVAEQHVETL-TSFCQHLNQAFFLGIKE-VEAHFACYNPGEFYALHRDNPQQKNDRIMSTVYYLHPQWQDDWGGQLRLQDKNDI------WHIITPEPNRLVIFQSN--LLHEVLVSK---QQRLSITAWLRSGNSIWV
4NHY Chain:D ((79-321))-------------------DPFLHCVIPNFIQSQDFLEGLQKELMNL--DFHEKYNDL--YKFQQSDDLKK--RREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDEL---EGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSL---


General information:
TITO was launched using:
RESULT:

Template: 4NHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 706 -9079 -12.86 -53.40
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.67

3D Compatibility (PKB) : -12.86
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4NHY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NHY-query.scw
PDB file : Tito_Scwrl_4NHY.pdb: