Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHRLSKIYTRTGDSGTTGLGDGSRVAKDDLRIAALGDVDELNAIIGVLRAQITDSQVANKADWDKSLSLIQHWLFDLGGEVCIPNY---------NLLQPVCIEFLEKEIDCMNEDLPMLKEFILPSGSLSCSYAHQARAVCRRAERSLMSVQSCDQNIQATALQLLNRLSDWLFVASRALQRAEGGQEVLWQKNINEMI
2IDX Chain:C ((4-186))-------IYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFALELVT-------HTFAEELQKIQCTLQDVGSALATPCSSAREAHLKYTTFKAGPILELEQWIDKYTSQLPPLTAFILPSGGKISSALHFCRAVCRRAERRVVPLVQMG-ETDANVAKFLNRLSDYLFTLARYAAMKEGNQEKIYMK------


General information:
TITO was launched using:
RESULT:

Template: 2IDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 724 612 0.84 3.58
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.74

3D Compatibility (PKB) : 0.84
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_2IDX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IDX-query.scw
PDB file : Tito_Scwrl_2IDX.pdb: