Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKLLIASLIAISSSSIFAADTTASAAKNDVFKQAEQLYAAKNYPAAFQEVQRLAQTGNAQAIYNLGYMTQMGQGTAKDNAKALKYYEDASNKGYAQASYTLAQIYETGELGVAKDSNKFSQYIQKAAAQGSDDATVKIATILFAQKKPQSHQIALQKLAPLIRKGNYPAIQVKALYDISQGVENKNPLMKRQGIEALQTIAQKGYAPASMALATMMANGNIIPQNLPQAKQIFTELAKQNVPNARESLASVEKIIAEKNKQAAAAPTQPAPKK------ 5JJO Chain:A ((4-268)) -----LRPFICVNEKDHLPSLDPQADAWYREAVALAKPDTLRPWDRIVDLYSKAVERGHWKAMHNLASLYRTGW---KDTQKALDLYQKMIDLKVPQGFYDMAAMIGN-RAGVKNPATDGLTFLDKAASLGNPPALTELGRLYIYVAGQDELGLKYTNCAA--GQGYAPANYELAMYYRL--VAHNYPKAAGYYLLAAS----QGNDDAAFFMSGVFDKTSPDVDRMWYAP---DEKLHKLYDGIYDQLAADPDLRFPNLIKDHPLPPHPTQGYDADRPD

General information: TITO was launched using: RESULT: Template: 5JJO.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1216 -47066 -38.71 -185.30 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -38.71 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.332

(partial model without unconserved sides chains): PDB file : Tito_5JJO.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5JJO-query.scw PDB file : Tito_Scwrl_5JJO.pdb: