Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEKLQQYAIGQRWLSDTETELGLGVLIDVDERSVSILFPKSDETRVYARNNAPLSRIIFNTNDEVQDQEGQKWIVESVEDRHGVLRYNVLRTLENGEQERKALNETRIGAQIQLSKPLDRLLASQIDYKEWYDLRIEAMLMQAQMQTSPLCGLVGARVGLIPHQLYIAHEVGKRFAPRVLLADEVGLGKTIEAGLIIHQQLKTGRSERILILVPD-SLQYQWMIEMRRRFN--LQFSLFDLTRTASIKEHDPELNPFLTEQCIIASVDLMVDHDDLR---EQALEVGFDLLVVDEAHHLMWSEEEGGNDRYDLV-EEL--AENTAGVLLLTATPEQLGVESHFARLRLL-------DPQRFSSLERFLDEEAQYQQTAQVAEVLMSDEPLTQEHLTALEGLLGHSIEDQ-----PE-QRFRAIHELLDRHGTGRILFRNTREAI-QGFP-GRDCQPAPL---P----APAD--WSKDGKLREQMWP--------------EEA----QIDGSWMQNDPRVPWLMEILRKEL-KHKKVLLIARSGPVVESLESALRLH-----AGIRTAMFHE--------GMSLLERDQAAAYFAEESYGAQILLCSEIGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLMGTAQERMFRWYNEALNIFSNISPTAQTLQENFIVELKDCLLADQGQTFEDLLEEVNVQRQALEAELQAGRDRLLEYNSCRPIVAQEIVQALEDYDDNTTLPMFVKRFMSSTNIDFDEQSNGTVIIRPTDQMQVQGLALDEEGMTATFYRDQAQMREDAQYLTLEHPFIESVMEMIRTQSFGSTNVAVLKSNALKQGSVLLEVWFKVDVVAPKSLNLPSSLPKQLIRVLLSENGQDLSEKIDPTILKPYLHHLDGNSCRQVVKARREVIEERYKQALDIAKEGLPQLQQQAKEHYGNKWQYEIDRLTYLKQFNPSIRQDEIERLQKLQKEGLSLLDGLTVTPEAIQVLVVVKP
5JAJ Chain:A ((9-481))--------------------------------------------------------------------------------------------------------------------------------------------------------------ELHGYQLEAVAPALR--GRNSIVWLPTGAGKTRAAVHVCRRHLEGRRGGRVAVLVNKVHLVQQHLEKEFHVLRDAFKVTAVSGDSSHKC----FFGQLAKGSDVVICTAQILQNALLSGEEEARVELTDFSLLVIDECHHTQKEAVYN-KIMLSYLQKKLSGQRDLPQILGLTASPGTGGETSFEGAVEHILQICANLDTEVIASAQ-----------QPTKQYDLCQEREQDPF-GQRLKKIMAQIQEHMEMPELPQNFGTQVYEQR---------I-VELENRAAERFCRKTRVCALHLRRYNDALLINDTVRMMDAFQCLQQFYADKDPTERFLATTFEENRATLQALAGDQRYENPRLSKLEEILQEHFQGSSRGIVFTKTRQSAHSLLSWLQDTAGLCGQHIRAAVLTGSGHSNQAKGMTQNEQQDVITLFRYG--ELNLLFSTSVAEEGLDIPECNIVVRYGLMTNEIAMVQAQGRARAQN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5JAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1738 10168 5.85 26.01
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 5.85
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_5JAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JAJ-query.scw
PDB file : Tito_Scwrl_5JAJ.pdb: