Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEQTIELTPTRPYLARAIYEWICDNQLTSYLLVDATQPHTDVPQQFVKDGQIVLNIVPHAVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAPVEDKLDSEKQETSEPTKKKPTLRILD
5GMK Chain:T ((75-87))----------------KDLYDWLIKEKYA-----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain T - contact count / total energy / energy per contact / energy per residue : 6 -2243 -373.75 -172.50
target 2D structure prediction score : 0.85
Monomeric hydrophicity matching model chain T : 0.55

3D Compatibility (PKB) : -373.75
2D Compatibility (Sec. Struct. Predict.) : 0.85
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.730

(partial model without unconserved sides chains):
PDB file : Tito_5GMK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GMK-query.scw
PDB file : Tito_Scwrl_5GMK.pdb: