Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSTPCKLRGDDFMAKISKYKKKNGQVAWMYKGHIATDPRTGEKINTTRRGFSSKQEAQKDYDEYRHQILYGVKKKAPDMTFEDLYNEWITHQRTSVKASTIAISVRYANNQILPAFGKLKLSNISVPYCQKVVDEWHSK----YESYDYMRKQTAQILRYGVAMQYIDNNPMEKTLLPRKKEYEKNRKFYSKEELNNLLDAFKDFGNMKQYAFFRLLAYTGMRKSEVLALQWKDIDTFNKELHVNKTLAVDEFGKVIIQSPKTRASRRVISLDTETLSILNNWKLQQKEEYLK--------------------LGYNTSSKEQHVFTTVK-----------NTLYIPNTVNDWLRYILKKYNLP--RITPHGFRHTHASLLLEAGESVKVVQQRLGHENSKVTLDIYAHITNNAPKKTGQDFADMMAHQ
2A3V Chain:B ((4-318))--------------------------------------------------------------------------------QFLLSVREFMQTR--YYAKKTIEAYLHWITRYIH-FHNKKHPSLMGDKEVEEFLTYLAVQGKVATKTQSLALNSLSFLYKEILKTPLSLEIRFQ---RSQL--ERKLPVVLTRDEIRRLLEIVD----PKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIW--------------QGKG-GKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGVWLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHHMNETVLQKAVRRSAQE-AGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTT-QIYTHVLDRGASGVLSPLS------


General information:
TITO was launched using:
RESULT:

Template: 2A3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1087 -20999 -19.32 -75.53
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -19.32
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_2A3V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2A3V-query.scw
PDB file : Tito_Scwrl_2A3V.pdb: