Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYTTLKEVTKTAEELNFTVGAFNTHNLEMLPAMLGAAKEMGSPIIIQTSVDTAKYIGMHVLVN-VMTAIAEEEMVDAVLHLDHARDFDDIKEAIDSGYTSVMYDGS-------HLPFKENILKTKAVVEYAHAHGVSVEGELGTIGGTEEGIHVAENDKVYTRPEDAVKFVEATGVDALAIAIGTNHGQFKSKTE-----VNIPLLKEIDAVV-DVPLVIHGGT---------------------GVKEEDYPELINNGIRKFNVGTELLVNWTKVAKETFSETEINKSLRHNVIPANEAVKEIVKHKIGLFMNLESPINLGNK
5U7S Chain:B ((13-331))---SMRQLLDHAAEHNYGVPAFNVNNLEQMRAIMLAADATNSPVIVQASAGARKYAGAPFLRHLILAAIEEWPHIPVVMHQDHGTSPDVCQRSIQLGFSSVMMDGSLGADGKTPTTYDYNVDVTRQVVAMAHACGVSVEGEIGC--------------QLLTSVEEAKQFVADTNVDALAIAVGTSHGAYKFTRPPTGDILAIDRIKEIHAALPNTHLVMHGSSSVPQEWLKVINEFGGNIGETYGVPVEQLVEAIKHGVRKINIDTDLRLASTGAIRRFMAENPAEFDPRKYFAKTVDSMKQICIDRYEAF------------


General information:
TITO was launched using:
RESULT:

Template: 5U7S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1374 -38176 -27.78 -146.83
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -27.78
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_5U7S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5U7S-query.scw
PDB file : Tito_Scwrl_5U7S.pdb: