Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSR--NC-DEAIEEIRKIPHLHNVNFFK
1ZPV Chain:C ((6-74))------------------------------------------------------------------------------------------------------------------------------------------------------AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL--DEYFTMMAVVSSDEKQDFTYLRNEFEAFGQTLN-----


General information:
TITO was launched using:
RESULT:

Template: 1ZPV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 201 -44818 -222.98 -679.06
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain C : 0.56

3D Compatibility (PKB) : -222.98
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.693

(partial model without unconserved sides chains):
PDB file : Tito_1ZPV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZPV-query.scw
PDB file : Tito_Scwrl_1ZPV.pdb: