Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFVNFFHEKEKIMRYDFGKVYKEIRESKGLTQEEVCG--GVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQTYLNMRSIIGTSDLVNLFQKCQDYLKT---HHDLPIEEIRDMLEVVIYLRQHGAGELSKHAEQVVKKLWKKIEKQDTWYESDL-----KILNTILFSFP---IEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAICYVRIGICT--------DDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER
5FD4 Chain:A ((21-324))------MEVWFMNDKEFGQRVRQLRESASMTREQFCDDELELSVRQLTRIEAGASKPTFSKIQYIATRLGMGLYELMPDYVSLP-ERYSKLKFDVLRTPTYGNEDLAEKRDAMMTEIYDDYYDELPEEEKIAIDAIQSRIDTLES---GTAGFGKEILEDYFEQIFRKRKYELNDLLIVRLHLEYVRLSSCDSEIFRQFLKIIEHLHEQINIIN--SNDLFVLRDTLLSCVNILGSKKYYEPIPKIFDSVDKIIQSTQDFQKKPIVSVLKWKYALFVDKDRDEAEKHYLDAVLFAKLIENRELEQKIEEDWRVDNQ----


General information:
TITO was launched using:
RESULT:

Template: 5FD4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1129 20098 17.80 71.02
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 17.80
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_5FD4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FD4-query.scw
PDB file : Tito_Scwrl_5FD4.pdb: