Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFPSEQEQIEKFEKDHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKR-VGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNALE-QLEISGGNKGIVTFDAKV--KSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFEPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELYYTL--GEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPT-TAGTGPMHTVFDALEVPM-V-AFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE
4MMO Chain:A ((2-435))-------------------DEELYTLIEFLKKPSISATGEGIDETANYLKETVEKLLGVKANLEKTKGHPVVYAEINVN--AKKTLLIYNHYDVQPVDPISEWKRAPFSATIENDRIYARGASDNKGTLMARLFAIKHLLDK-NELNVNVKLLYEGEEEIGSVNLEDYIEKNTNKL-KADSVIMEGAGLD-PKGRPQIVLGVKGLLYVELVLDYGT--KDLHSSNAPLVRNPCIDLAKIISTLVDMGGRVLIEGFYDDVRELTEEERELIKKYDIDV-EELKKALGFKELKY-NEKEKIAEALLTYPTCNVDGFECGYTGKGSKTIVPHRAFAKLDFRLVPNQDPYKVFELLKKHLQKAG---FNGEILAHGFEYPVRTSVNSTVVKAMIESAKKVYGT-EPQVIPNSAGTQPMGLFVYKLGIRDAVSAIGAGGYYSNAHAPNENIKIDDYYKAIKHTEEFLKLYP


General information:
TITO was launched using:
RESULT:

Template: 4MMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2279 34474 15.13 81.11
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : 15.13
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_4MMO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MMO-query.scw
PDB file : Tito_Scwrl_4MMO.pdb: