Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVQLLENWLLKEQEKIQTKYRHLNHISVVEPNILFIGDSIVEYYPL------QELFG----TSKTIVNRGIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGKDVPVNEALNNLEAIIQSVARDYPLTEIKLLSI-LPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQAGQLKKEYTTDGLHLSIAGYQALSKSLKDYLY
5TIF Chain:A ((3-177))-----------------------------GMDTLLILGDSLSAGYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAA--NAEPLLMQIRLPANYG-----------RRYNEAFSAIYPKLAKE-FDVPLLPFFLEEVKKK---PQWMQDDGIHPNRDAQPFIADWMAKQL-


General information:
TITO was launched using:
RESULT:

Template: 5TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 793 13981 17.63 85.25
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 17.63
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_5TIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TIF-query.scw
PDB file : Tito_Scwrl_5TIF.pdb: