Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTLAKIEALLFVAGEDGIRVRQLAELLSLPPTGIQQSLGKLAQKYEKDPDSSLALIETSGAYRLVTKPQFAEILKEYSKAPINQSLSRAALETLSIIAYKQPITRIEIDAIRGVN---SSGALAKLQAFDLIKEDGKKEVLGRPNLYVTTDYFLDYMGINHLEELPVIDELEIQAQESQLFGERIEEDENQ
4EM0 Chain:B ((48-132))---------------------------------------------------------------------PYLKLTEPILE---KHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSL-EDKRQKFLTLTPKGHELY----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4EM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 280 -12014 -42.91 -146.51
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -42.91
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4EM0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EM0-query.scw
PDB file : Tito_Scwrl_4EM0.pdb: