Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------MEQLHFITKL--------LDIKDPNIQIL-------DIINKD-THKEIIAKLDYDAP------SCPECG---------SQMKKYDFQKPS---KIPYLETTGM-PTRILLRKRRF-----KCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLS-------ISTSTVIRKLNDFHFKHDF-SCLPEIMSWD--------EYAFTKGKMSFIAQDFNNLNIITVLEGRTQAVIRDHFLKYDRAVRCR--VKIITMDMFSP---YYGLA------------------KQLRFHIVQHLSRA-MSRVRVQIMNQFHRKSHEYKAIKR----------YW----------KLIQQDSRKLSDK--QFYRPTFR--------------------MHLTNKEILNKLLSYSED-------LKHHYQLYQLLLFHFQNKE----------PEKFFGLIEDNLKQVHPIFQTVFKTFLKDKEKIVNALQLHYSNA----------------KPEATNNLIKLIKRN------------AFGFRNFENFKKRIFIALNIKKERTKFVLSRA--
5L8S Chain:A ((1-604))MINFPKPTVEQFFRTYTITNFAVSSDEKRLVFNANLNGKMNLWAMDLPDTYPYLFAHRDESCNFIKFDPENRYVLAGFDKDGDENYQIYAIPNEGGLPHPLITGDASEKYYFSHLSADGKCVYYETSKENPSFLNTRIRNLETGEDRLLNVGEVSTTELAAVSENEESFVYLRAFANTYIVGFVKMGEETFNITPDPEKVHVAMEPVFTDNETIYFATDYDSDEMYLAKFDLTSKEFSKVLAFDGESIQSVKWDKDNKAFYLITVKGVTDILYRYDVATDKVEECSLPVDIIEQIQVAKSGNLYILGRSATVPHNVYQSSNGVEWKQLTNNRVLGLSPEDMVEPDIVSYTSFDGMEIEALLFKAKPENDNGYTIFWPHGGPQSAERKMFRSMFQCFINRGYTIFAPNFRGSTGYGSAFTKLVELDWGEGPRLDCIAGIEWLFESGFTDRNKLFLVGGSYGGYMALLLHGRHSDYFRAVVDIFGPSDLFTFINSVPPHWKPIMERWLGDPERDKERFIKDSPVTYLDGMVKPMLVIQGAKDPRVVKEESDQIVAKLKEKGRDVEYLVLEDEGHGFSKKENEIKVYSLMLAFLEKHQALEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 5L8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2220 23184 10.44 56.68
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 10.44
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.151

(partial model without unconserved sides chains):
PDB file : Tito_5L8S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L8S-query.scw
PDB file : Tito_Scwrl_5L8S.pdb: