Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLHFTFLGTSSGVPTLSRNVSGLAVR----NSKNKDWILVDAGEGTQHR---IQQAR-------------------------------------------------------LSLQNLIAICITHVHGDHCYGLVGLLASAGMNARNNPLIVIAPKEIQQWFEITA-QLTDL---H--LPYSIKFIDVNEATRPQ--QLTDELFIQAHPLSHRVP--------SFAFSIYIKSTQKKIDIQALTQLGIPKGDIWGHLKRGYDVEFEGRILKSQDFIKIQNQQIHAIIGGDNDRPE-----LL-----ADAC-----KDAQLLIHEATYLQTVLDKVGKGPMHSSAKMVAEFAEQ----------QSLDNLILTHFSPRHQDKTGQQAIIEEVRQF-----YKG-HFYLANDFDEFTLNETGQLLKIE
4OJV Chain:A ((3-369))VFEITILGANGGP-T-EYGTQCFILKPARTE--DPELIAVDGGAGMYQLREMLVQG-DDELVPSFYEHDREPIEFFIDSKLNIQKGLSKSLLQSLKRQGEHFESANTMKKTYEVFQGITDYYITHPHLDHISGLVVNSPSIYEQENSKKKTIWGLPHTIDVLQKHVFNDLIWPDLTAERSRKLKLKCLNP-K-EVQKCTIFPWDVIPFKVHHGIGVKTGAPVYSTFYIFRDRK-----------------------------------------------SKDCIIVCGDVEQDRRESEESLLEEFWSYVAENIPLVHLKGILVECSCPLSSKP-EQL-YGHLSPIYLINELSNLNTLYNSSKGLSGLNVIVTHVKSTPAKRDPRLTILEELRFLAEERNLGDLRISIALEGHTLFL----------


General information:
TITO was launched using:
RESULT:

Template: 4OJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1213 28349 23.37 112.50
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 23.37
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.344

(partial model without unconserved sides chains):
PDB file : Tito_4OJV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OJV-query.scw
PDB file : Tito_Scwrl_4OJV.pdb: