Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKPVPKIYRTTNWSSYNQALIKRGNISIWFDPKTQWYAQPQGKHGRNQTYSDAAIQCCLMIKSLFRLSLRMVTGFAQSLIKLCGLNWTAPDYSTLCRRQKRIDIAISYQQSRDGLHLLVDSTGLKFLGEGEWKRKKHQPAYRRQWRKLHIGIDAKTLQIRAVQLTTNNVSDSQVLGDLLDQIPLDERIDSVYTDGAYDTKHCRQVILDRDAHAVIPPRKNAKPWKDKKLRSLARNELLKTVKRLGRSLWKKWSGYH-RRSLVETKMHCIK 5AF3 Chain:A ((11-238)) -LRFDVPLYTLAEASRYLV--VPRATLATWADQPIITALPHPTGSH-------------ARLPFVGIAEAYVLNAFRRAGVPM-----------------QRIRPSLDWLIKNVGPHALASQD----------LCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISFAD--DNLASMIRLPQYGDANVVLD-------PRRGYGQPVFDG---SGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDA--

General information: TITO was launched using: RESULT: Template: 5AF3.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1061 -77568 -73.11 -364.17 target 2D structure prediction score : 0.53 Monomeric hydrophicity matching model chain A : 0.61 3D Compatibility (PKB) : -73.11 2D Compatibility (Sec. Struct. Predict.) : 0.53 1D Compatibility (Hydrophobicity) : 0.61 QMean score : 0.212

(partial model without unconserved sides chains): PDB file : Tito_5AF3.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5AF3-query.scw PDB file : Tito_Scwrl_5AF3.pdb: