Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAKLNFKSEQDFFILFEQLKALFPNASLFLADTSTQAIHYKFNTDDISVESMTALTQDHHNRYLEINTPKMRKRFIYQENDIYIAEHRIIGKLHILQPVSIENDIADQVELTEQLQDLAKVFNSCSPEMTRMFSIIQRVAIAEFPVLVRGESGSGKELVAQAIHDYSQRKNKIFVAINCAALNSNILESELFGHVKGAFTGAIRDHKGVFERAAGGTLFLDEIAEIPLELQAKLLRVLETGEFTPVGGEKPIQANVRIITATHKALREEAKAGRFRHDLLYRLRVIPIFIPPLRERKVDIPLIVDQILKESSTQLDTMPRHVNQKAMQVLLNYDWPGNVRELKNTLLYALTMANGKDEIEVEDLPNELLDADEYVKLPENNAELTPENVQAALEKYNHNLNMVANIFGISRTTLWRYRQKHKL
1NY5 Chain:B ((143-373))-----------------------------------------------------------------------------------------------------------------------------SPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGK-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1058 -130012 -122.88 -562.82
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -122.88
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_1NY5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NY5-query.scw
PDB file : Tito_Scwrl_1NY5.pdb: