Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQFAVIGNPIEQSRSPELHHA----FAEKTGVDLNYQKRLAPLDGFESSMRS-FFAEGGSGMNVTVPFKEQAFALCNVLTERAQIAKAVNTLWMENGKLHGDNTDGQGLVAAIQALEWNLENTTILILGAGGATRGVIYPLVQAGAKKIVI--ANRTLARAEQLVDDLKTAVPQAQLQAISLNDLEGDFDIVINATSASLSGDALQLPEKLK-----FKYAYEMAYGKPSSFLDQAKQRNVPYAEGFGMLVGQAIEAFSIWNGVRPQLKDFL
4FR5 Chain:A ((4-246))--KSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPL---ESHIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK--QKNYQNA--LILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKSA------------FDLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLASGFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFS----------


General information:
TITO was launched using:
RESULT:

Template: 4FR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1273 10200 8.01 44.16
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 8.01
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.362

(partial model without unconserved sides chains):
PDB file : Tito_4FR5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FR5-query.scw
PDB file : Tito_Scwrl_4FR5.pdb: