Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKVLRVLVTTTALLAAGAAMADEAVVHDSYAFDKNQLIPVGARAEVGTTGYGGALLWQANPYVGLALGYNGGDISWTDDVSVNGTKYDLDMDNNNVYLNAEIRPWGASTNPWAQGLYIAAGAAYLDNDYDLAKRIGNGDTLSIDGKNYQQAVPGQEGGVRGKMSYKNDIAPYLGFGFAPK----ISKNWGVFGEVGAYYTGNPKVELTQYNLASVTGNPTSAQDAVDKEANEIRNDNKYEWMPVGKVGVNFYW
2JMM Chain:A ((22-134))----------------------------------------------NQLGAGAFGGYQVNPYVGFEMGYDWLGRM---P---------RKAQGVQLTAKLGYPKLGT--DDL--DIYTRLGGMVWRADTSD--KDG--------NG-------------YISAA-EASVSPVFAGGVEYVIRRRITPEIATRLEYQWTN------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 373 -5179 -13.88 -47.51
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -13.88
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.034

(partial model without unconserved sides chains):
PDB file : Tito_2JMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JMM-query.scw
PDB file : Tito_Scwrl_2JMM.pdb: