Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITKTLPLTDIHRHLDGNIRIQTILELGQQYNLDLPAYDIESLRPHVQVMDNQPDLLSFLSKLDWGVKVLASL-DACKRIAFENMQDAAQQGLDYVELRFSPGYMGMAHQLPL-----EG------VVEAVIAGVKEGSQAYGVKANLIGIMSRTFGQEACEKELNALLA--HKNDIKALDLAGDELGFPGNLFIDH---FKKARDAGWHITVHAGEAAGPESIWQAIEELGAERIGHGVKAVQDLKLLDYLAKHQIGIESCLTSNIQTNTVPSLAEHPLKTFLEHGVLATINTDDPAVEGIEIQHEYLTAAPLAGLSPEQIYTAQENGLKIAFLSEQEKDELRQKYQ
1W1I Chain:E ((10-343))------PKVELHVHLDGAIKPETILYYGKRRGIALPADTPEELL-NIIGMDKPLTLPDFLAKFDYYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVSLVNQGLQEGERDFGVKVRSILCCMR--HQPSWSSEVVELCKKYREQTVVAIDLAGDETIEGSSLFPGHVQAYAEAVKSGVHRTVHAGEVGSANVVKEAVDTLKTERLGHGYHTLEDTTLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQVNYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLPEDEKKEL-----


General information:
TITO was launched using:
RESULT:

Template: 1W1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1851 41123 22.22 129.72
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain E : 0.76

3D Compatibility (PKB) : 22.22
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_1W1I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W1I-query.scw
PDB file : Tito_Scwrl_1W1I.pdb: