Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------MNRTLKELILAAEFAAIISVLSQMTIPFGLV-------------PLTGQTFAIGLTATFLGRKLGLISVGVYLLLGLI-----GLPVFSGMTGGIAVLFGPTGGYLIGFLLQTWITGWMI---ERTDAHY-LYAIFANLMGSLAALICGTI-----------------------WLKISGDLTFT----TAFASGLLPFLLPEAIKATGAAYIGIL------MKKRLNRFLHTN
4ECF Chain:A ((2-261))AGESITAVGSTALQPLVEAAGEQYTGEHLGTFINVQGGGTGTGLSQIQEGAVQIGNSDLFAGEQKGINARQLVDHRVAVVGITPIVNKKVGVKNLSTNQLIKIFTGQITNWKEVGGADQSIVLINRAQGSGTRATFEQFGLANHRSKTAQEQDSSGMVRSIVATTPGAISYVAFSYVNKTVQALSLNHVAPTEVNVTTNDWRIWSYEHLYTKGHPTGLTKAFITYVQSPAIQNTLVRQLGYLSPDQMLVERDANGHITKT


General information:
TITO was launched using:
RESULT:

Template: 4ECF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 897 -59655 -66.50 -333.27
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -66.50
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.232

(partial model without unconserved sides chains):
PDB file : Tito_4ECF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ECF-query.scw
PDB file : Tito_Scwrl_4ECF.pdb: