Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDQKDFRENLELKPVTQEHIDQFNELLSYVFQVTEADIEESGFENKRAFIRSKKPILEVSKVFGWFHENKLISQIAIYPCEVNIHGA-RYKMGGVTGVGTYPEYANHGLMQDLIIVALDNMRKNKQWISYLYPYSIPYYRRKGWEIMSDKLSFKIRDTQLPKQI--PV----SGMVERLP-V-DHPDVFSVYDKFAQQNHGALFRSDFHWEEYWRFENED-ERTAAVYYDSNHEPRGVLFYWVAE---EIFHVKEMFYLDQEARNGLWNFISAHFSMIYWVHGDIYKNEPLAFLIEDSQI--KEQIEPYFMARIVDVKEFLQRFPFVGT--ADAFHFIIEDPVAPWNNGVFALTWDEQGQVRVLNEPIGKSVRLDIQTLTCLMMNYRRASYLARIERLE-TDEETLKSLERIIPNMEAYFSDYF
5EC4 Chain:A ((23-418))---------VTLCSPTEDDWPGMFLLAAASFTDFIGPES-------ATAWR---TLVPTDGAVVVRDGSEVVGMALYMDLRLTVPGEVVLPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHASEGGIYGRFGYGPATTLHELTVDRRFARFHADAPGGGLGGSSVRLVRPTEHRGEFEAIYERWRQQVPGGLLRPQVLWDELLAEAKAAPGG-DRESFA-LLHPDGYALYRVDRTDLKLARVSELRAVTADAHCALWRALIGLDSME-RISIITHPQDPLPHLLTDTRLARTTWRQDGLWLRIMNVPAALEARGYAHEVGEFSTVLEVSD------GGRFALKIGDG-RARCTPTDAAAEIEMDRDVLGSLYLGAHRASTLAAANRLRTKDSQLLRRLDAAFASDVPVQT---


General information:
TITO was launched using:
RESULT:

Template: 5EC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1868 -57843 -30.97 -154.66
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -30.97
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.398

(partial model without unconserved sides chains):
PDB file : Tito_5EC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EC4-query.scw
PDB file : Tito_Scwrl_5EC4.pdb: