Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MMNLSNRFSPRLSRIEVSKIRQFDQQISSIPDVIKLTLGEPDFPTPEHVKQAGIAAIEEDFSHYTGMRGLEELREAACIFQQQRYGLTYDPQTEVLTTVGATEAIASALLSVLEEGDKVLIPAPAYSGYQPLVELAGAELIPIDT-SDTGFVCQPEQFERAFEQYGSAVKAVILNYPNNPTGTTLSAKQLKAIAEVLKKYPVFVISDEVYAELTYSGTHMSIATYLPEQTIVISGLSKSHAMTGWRVGFIFAQKALIDELIKVHQYLVTAATTMSQKAAAEALINGVKDS---ENMKEQYQTRRDYLVQQLAPLGFEVTQPNGAFYLFCKLPAAIQTDSWQFCVELAEQAKVACIPGIAFGPEGEGYIRISYASSMEKLHEACKRIKDFLTEQ 1BKG Chain:D ((32-382)) -------------------------------DLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPE-ETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR---TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDT-SPIAPDEVRAAERLLE-AGVAVVPGTDFA--AFGHVRLSYATSEENLRKALERFARVL---

General information: TITO was launched using: RESULT: Template: 1BKG.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2066 -80577 -39.00 -232.21 target 2D structure prediction score : 0.74 Monomeric hydrophicity matching model chain D : 0.79 3D Compatibility (PKB) : -39.00 2D Compatibility (Sec. Struct. Predict.) : 0.74 1D Compatibility (Hydrophobicity) : 0.79 QMean score : 0.530

(partial model without unconserved sides chains): PDB file : Tito_1BKG.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1BKG-query.scw PDB file : Tito_Scwrl_1BKG.pdb: