Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLKTELVIFDWDGTLYNSVGQIVASLQHAAEEHKLTLTDEAAKSIIGLGLPEVMQTLFPEVPDLHDSI----LKAYGDHYIANST-NDAWFEGISELLHDLKAQGLKLAVATGKNRRGLDRVIAKTQSTHLFDVTRAAN---ETRSKPDPLMLQEILTVTGVSVEQAVMIGDSSYDLEMAQRLGMPRIGVGYGVHSVEVLQQFQPLTIAKDVSELHNFLREYAKLSTVDVA
3MC1 Chain:A ((7-211))-------VLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKF-VGPP--LKTSFMEYYNFDEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKED--VIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELH---------------


General information:
TITO was launched using:
RESULT:

Template: 3MC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1075 3983 3.71 20.22
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 3.71
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_3MC1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MC1-query.scw
PDB file : Tito_Scwrl_3MC1.pdb: