Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMARMAKVVELPSIAKIDKSKGKISAQLTQALREAVQSGDLQPGDPLPSSRELALTLGVARGTIIEAYDQLLAEGVFDSQPRTGTYVSHALVKTSAIQHSSKENKPNSISLNKSARSYAKVLDEFKPLPHVPFAVSVPIARTQPSDIWRKFGNKFRSRGAGVPSGYGEPQGVLSLRIAIADYVRRSRSVHCEPEQIVITPSIQQSLYICNQILFEAKDEVW-VEDPAYRGTTAIFEHTVQNIRMVRVPVDEEGIQIETGIKLSKQASAAFVTPSHQYPLGMPMSLARRTALLAWAKQQNA-WIIEDDYDSELRYNGQPFPSLQGMAPDQ-AIYLGTFSKVLFPSLRLGYAVLPKELVAPFCGLRVLIDRHPPAADQHVLAAFIQEGYLERHIRRTRNVYAEVREYIIGLIEKYIPQELAWLQLGDQGMHMVLWLAQHINDIDVASSAVDAGIAIKAISPTFSKERRRS----GLIVGLGDFEPELMQQAIKKLSKIIQQHAKSM
5T4J Chain:B ((17-365))----------------------------------------------------------------------------------------------------------------------------------------------PIKSWFRCEQKAASRSYATLGDMSHPQGIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTELL--PKEAVYAMEEPGYRRMYQLLKNAGKQVKTIM--LDEKGMSIAEITR--QQPDVLVTTPSHQFPSGTIMPVSRRIQLLNWAAEEPARYIIEDDYDSEFTYDVESIPALQSLDRFQNVIYMGTFSKSLLPGLRISYMVLPPELLRAY-KQRGYDLQTCSSLTQLTLQEFIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVT-VKGANAGLHFVTEFDTRRTEQDILSHAAGLQLEIFGMSRFNLK-----TGRPTLIIGFARLKEEDIQEGVQRLFKAVYGH----


General information:
TITO was launched using:
RESULT:

Template: 5T4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1699 -37322 -21.97 -110.75
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.72

3D Compatibility (PKB) : -21.97
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_5T4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T4J-query.scw
PDB file : Tito_Scwrl_5T4J.pdb: