Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMMNRKFAMGLALFSGLAFTHSLQAASFSCNAAKTTTELSICKNRSLNDADVKMAT-TYQIVLHALPMGGRDNQKDTQQQWLKKRNACAANVSCISKAYQQRQKQLDTILQDRVLSHGPF
4DNK Chain:A ((171-234))-------LGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DNK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 171 -16644 -97.33 -264.19
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -97.33
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.216

(partial model without unconserved sides chains):
PDB file : Tito_4DNK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DNK-query.scw
PDB file : Tito_Scwrl_4DNK.pdb: