Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYEPYPVPEQVREQKLSRYSSLWTFAKQDLRLLLFFLIIAGLVGLGIGYFWSCIFIAFVVFFTLQLRSLYLVNDWIANNPYDVPPNLNGIWGALLFNVYRAQRQERIVQAEMVGLIDRAQSSLVALAEAVVLIDDQHQIEWWNPAAERLLGISPLDRGRNLLTILRQPTFIEYFNNIDQAPDGIKLHSNLDDDRYVQVKLTRFGGESRLLVAYDVTRMHNLEQMRKDFVDNISHELRTPLTVLSGYIETFTDQEDINPRWKRAFDQM-QSQTKRMNALVNDLLLLSNLENNKKIAKNQIIEMPSLMNQLFDD-----AQAYNADYGHTLNLHIDSHCDLIGSDME-IASAFSNLITNAIKYTPKGGTITIGWHDDGEHAYFSVQDTGIGINPKHLPRLTERFYRVDSDRSRQTGGTGLGLAIVKHVLMQQGAYLDVQSKENEGSTFTAVFPKERLYNMT
4ZKI Chain:A ((25-263))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTEQQKIDNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKD-NPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFRVDK-----QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE------


General information:
TITO was launched using:
RESULT:

Template: 4ZKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 822 11978 14.57 53.00
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 14.57
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_4ZKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZKI-query.scw
PDB file : Tito_Scwrl_4ZKI.pdb: