Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATVDLFAIGNALIDQEFKVSDDFLSQQGLQKGTMQLSDGETQSALYEKLKQTQDYKGQASGGSAANTTVAFSALGGSAFYGCRVGHDELGGIYLQGLNDAGI--QTTPKSISEGVTGTCMVLISPDSERTMHTYLGITAELSQDQIDFEPLKTAKWLYIEGYLSTSETARKAVKQAREIAKAHGVKIALSLSDPAMVQYAREGLEELMDDG-VDLLFCNEQEALMYTNTTTVEDALTQLLFKNHTVVITQSAKGALVANPTHHFHVAGHHV-EAVDTNGAGDAFAGAFLYALNHHEDLTAAAQLAILISSEVVSQFGPRLAINDYAKLLENFQKECA
4JKU Chain:A ((27-337))----DVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPAL----EASGGSAGNTAAGVANLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFP-PTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDDFEEALNRIAADCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSLEDCGKLGCLAAGIVIQQIGPR------------------


General information:
TITO was launched using:
RESULT:

Template: 4JKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1908 -32064 -16.80 -104.44
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -16.80
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_4JKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JKU-query.scw
PDB file : Tito_Scwrl_4JKU.pdb: