Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLGDFTMTDIVTRTELEEAKVDCKDLGDALNTKKVINPRYGEAFYSLPLAVQKVMETGGFEPFLTQAQLLSSTPTISPKAAKALDTGKIWYWGKGEGETEDSWHDTGLSELDQAISFTAEKMSFEYAEKLFKWEDLNKIPVMYLDALARLWLANLPKDVATHIGEFIDMQKSVYTQNGKNLNALYDSTGLPVAWITSDGKTVLPKIGVLTDYIENKVASVNRQYVDSVNQSAFLTDSLAVQTMGEFQQQQTVITAADVNAAAVFPHNVTKLRIPAITRIQKNKYLCFFEARLNDDDFGENSQGVCTLTVNESTFEITTSDIKALHAREVRPSGGFYTFMNACATKLDSGRVICLYVKRYGTSEHYIYKRYSDDDGLTWSDYENIGTQLNMTFYNLL-CPCSQGLVKRYGSNNGRIIFPVWYSGKAYVASDFRAGYIYSDDGGTAWHDGAFA-------------------EIPYGNEVQCAEDLNGDLIFAIR-----------------LDQTVGGGTN--DPTIQVKKL--VKLLNGTLSTFIDIPAPR-LTNARVMSGLIQSKNAYDRSTPKLQFICANDLNRKNLKVWNSYDSGLNWTQYDVPNTEVFAAYSCIEKLSYEKNLLLWEADNYSSLKTSIVSLRNLIGVA
2VK7 Chain:A ((168-430))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTKIDNINSSTAPLKAKGTS--YINLVYSDDDGKTWSEPQNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNEKGKQS---SAVIYSDDSGKNWTIGESPNDNRKLENGKIINSKTLSDDAPQLTECQVVEMPNGQLKLFMRNLSGYLNIATSFDGGATWDETVEKDTNVLEPYCQLSVINYSQKVDGKDAVIFSNPNARSRSNGTVRIGLINQVGTYENGEPKYEF---------------------DW-KYNKLVKPGYYAYSCLTELSNGNIGLLYEG--------------------


General information:
TITO was launched using:
RESULT:

Template: 2VK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1081 31315 28.97 141.70
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 28.97
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.350

(partial model without unconserved sides chains):
PDB file : Tito_2VK7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VK7-query.scw
PDB file : Tito_Scwrl_2VK7.pdb: