Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQLQLDIEPQLDARISDFSGPGWGHVVDAVRQLHAGLVNRFYIYGGAGTGKSHLLSAICDSYLEVGKSAIKVSLLELLDAPIEAI---------TCLEHYDLVALDDIESISGVPHWQKAVFHLMNN---HEGQLVFSSRVAPIELKLELPDLQSRLTQAVSVKVPSGSLYADRYALVTSVMARRGIHFDQQIVDYLLLHGPHQASVLLQTVAQLEKLLKGEKTKLSNATLRQIYALIDEYQQ
3R8F Chain:A ((26-199))--------------------------VKEALENL-GSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELDN--KTRFKIIKEKLKEFNLELRKEVIDYLL---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3R8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 658 -10122 -15.38 -64.06
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -15.38
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_3R8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R8F-query.scw
PDB file : Tito_Scwrl_3R8F.pdb: