Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASHYEMFPAVVTRVEQLTP---LIKRFTFKRQDGQNFPRFSGGSHIIVKMN-----EQLSNAYSLMSCTQDLSTYQVCVRKDVEGKGGSVFMHDQCNEGCEIQISEPKNLFPLAETGNKHI-LIAGGIGITPFLPQMDELAARG--AEYELHYAYRSPEHAALLDELTQ------KHAGHIF-----------SYVDSEGSMLNLDELISSQPKGT-HVYVCGPKPMIDAVIDCCNKHRYRDEYIHWEQFASTVPEDGEAFTVVLAKSNQEIEVQSNQTILQAIETLNIDVACLCREGVCGTCETAILEGEAEHFDQYLSDAEKASQKSMMICVSRAKGKKLVLDL
1GVH Chain:A ((156-391))-------------RIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSL-TRKPDGKGYRIAVKRE-EGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEG-LMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFG-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1074 12566 11.70 60.71
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 11.70
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_1GVH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVH-query.scw
PDB file : Tito_Scwrl_1GVH.pdb: