Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAWTPHVTVATVVEKDGRYLFVEEHSEGFVHTVFNQPAGHVECGETLTEAAIRETLEETGHHIDIDALLGIYTYTPPMFPDRT-YYRFCFLAHVTHVESDPKLDTGIVSAVWMTLDELKESARARSPLVIKAIEDAMKGQHYPLALI--YEHPFSPSLTSHLDA
4NFW Chain:A ((4-149))-----PHVTVACVVHAEGKFLVVEETING--KALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQW---IAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFT---------


General information:
TITO was launched using:
RESULT:

Template: 4NFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 702 -61247 -87.25 -428.30
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -87.25
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_4NFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NFW-query.scw
PDB file : Tito_Scwrl_4NFW.pdb: