Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKSAFKRFVQQSPSTVKDNVFAVVAYCPINNLANADLGYEWQYNASRNDSNTGNLNGVSYSAGP------QLTASKE-----IAEKFPMYLQTLNLKLPNGQQLT-----AENMPDQIKEQIKSEIERQLAKGTPVPNFGENFVSSKATLVNDWLKHDGSKVTEIDYQKFLNYVAANQALKTVVAFDAVGVNGNTAISGETNLFGDSQNEYNNFTQWSWDHNSKTADGSGQDDTGLSWENYLNSNSSTANLLKDQLKMVNPIAYLNTTTD-TAPYWYIRHGVLDRDTSFAMQMILYYAVTNDPKVKDTNFKLPYLTGHAGNYDVQEAFKWINEKLNTTQ 4J0K Chain:A ((192-466)) -----------APAT--DDIFAVSAYCPIHNLEHADMAYEWQFNGINDWHR-------------FEPVSGQLTVEEQALSLALKAQFSTYLNQLKLTASDGTHLTLNEAGMGSFRDVVRQLLISSAQTAFDQGTDIHKYAGFVVT-------------GNQVTDLDLSAYLKSLT---RMKAVPAFDQLDLT-----SPENNLFGDATAKAKHFTALAQTRSTVTA------------------QLADAEL----IQAINPLSYLT--SSQVAKHWRIRHGAADRDTSFAIPIILAIMLENHGYGID--FALPWDIPHSGDYDLGDLFSWID-------

General information: TITO was launched using: RESULT: Template: 4J0K.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1159 -1977 -1.71 -8.17 target 2D structure prediction score : 0.66 Monomeric hydrophicity matching model chain A : 0.75 3D Compatibility (PKB) : -1.71 2D Compatibility (Sec. Struct. Predict.) : 0.66 1D Compatibility (Hydrophobicity) : 0.75 QMean score : 0.391

(partial model without unconserved sides chains): PDB file : Tito_4J0K.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4J0K-query.scw PDB file : Tito_Scwrl_4J0K.pdb: