Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKERFQMKKYQWGIVGLGTIAHEFA---ESFNQETSELTAVASRTSEKAENFAHRYNIPKAYGSYQEMLDDAEIDIVYIAVPNRQHIDHILAALEAGKHVLCEKAITMNKKELADAMRLAEEKNLILAEAMTIFNMPLYQQLRSIMDTGKLGALKMIQAPFGSYKEPDPKNRFFNPELAGGALLDIGTYAVSFARFFLSSQ-PEVVASTMVPFETGVDEQSVTILRNKENEL-AAVSLTFQAKMPKVGIVAFENGYVTIADYPRADRAEILFTDGTKEFI-------ESGNTSEAMNYEIKNMVHMIEGDL---PNRSLFLTKDVIEILDQMQVLWKNM
3OHS Chain:X ((4-322))----------RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFGKNLTHVP--RAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRHETGVDD-TVTVLLQYPGEVHGSFTCSITAQLSNTASVSGTKGMAQLLN-PCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADILEEVR------


General information:
TITO was launched using:
RESULT:

Template: 3OHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1721 -7030 -4.08 -23.12
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain X : 0.78

3D Compatibility (PKB) : -4.08
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_3OHS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OHS-query.scw
PDB file : Tito_Scwrl_3OHS.pdb: