Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEERFDWMTFGDDVSGAQAGSAAPPSTGADEDVPIFLREDVGMVRAGASHATAASESTGVDSENGAPAFLAVCPGADVAPRLSGGWSSEGSPVWDGSLRQQQKPSSTAALGHPGGAGDVQAAPSAALYADQPSAAVLHFTGDSGRSWGALHRVRILGKGSYG-CATLYSMKDAASGGVEPTHAVVVKDINMQTMLNPAEEVLAVQNELKVLRTVLGHPNLVQYVDALFDTRPPTYPMSFIMMEYCAGGDLAAVMDGRRSDSATTNGAPSSPPSIPLAITTASTAAGPDILTEPCVASLFIQVAVALQSLHTE-YGILHRDVKPHNIFLLEDGI-TVRLGDFGISTQLDRVGDTAKEACGSPYYMAPELFEERAYGAAADVWSLGVVFYQLIARQLPFTAASAAELRSLVCRGRCTPLHDLQNEAASRYSRQFKELVSSLLTVDAAARPTLRRVLRHKYVRESLKYVPASVLTAKKPLPPARVPSAGAMPSSSLQRFSADGLYAGLFGSDVVEQAVSQAVHAGVYPIVSRVHSA
2XNP Chain:A ((14-273))-----------------------------------------------------------------------------------------------------------------------------------------------------------IGTG-YGRCQKIRRKSDGK--------ILVWKELDYGSMTEAEKQMLV--SEVNLLRE-LKHPNIVRYYDRIIDRTNTTL---YIVMEYCEGGDLASVI---------TKGTKER-----------------QYLDEEFVLRVMTQLTLALKECHRRS----HRDLKPANVFL--DGKQNVKLGDFGL-------------FVGTPYYMSPEQMNR---NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI-------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2XNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1016 -53868 -53.02 -231.19
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -53.02
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_2XNP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XNP-query.scw
PDB file : Tito_Scwrl_2XNP.pdb: