Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGPDCTAGGNGGGAHRYPPHRDVRGDEEASPRCPSPHRMRLQKQQCFQSSPENQQQQHPRALSSSNPGSPLMYTVCPATPDRSMNPYDRASPLYRSHASPHSRLGDSASPSSAMTEAGMYESNSDLSAVCPTWFNRCAASSPSLSSVMASRHLPPLQAHSPDPQSRCPQPFNSIAAAVSYSSPLGVASNESPHMKTALTSFGEASWGGLTSPNSNRGGMMASAPQQQSLGNCRSNVGHVMLPEEVSHPSKLAQSGMLNSSPSHSGGAGPARVSGASPYQCALDGLASQQQEKQQQSTLERYAPGNVTTPVGASSSAAAGGASPGSVPTGDADADKIVPRQHGDNNSLALNSSLEERLPTTAASVPHRHTSPSSVSWPRDAFASSPFSRDAPPSSHLHPRAAISPARESTPVMPLKTSPKTTSTPLRVDDSAPGGVEADCFSEARGSRASPPRPHAFSQHQSPEKGFIDSQSTGTPHPQPQPIHPLAPTSSSPQALKSPAMFGVIDLSYSRTDASGSNATPPMPTGATSVGASAVVKTRTQVRTPSRAPAVISVRVPVPSLPSNNSTPATSVNHADPTAAAASLSSTSAAATAVAPLNGGSSCSELTAHSGTTILRMVHSAGQRDSSYSTLHTTLSHSRDATTATATTTATTTPGYSPRADSQTPVHTATIASQHGTLFTPLSPLLAESDDDAVEAEQQQQQRKAVQSQQHMKSVASTALMAARVRKTAVSSPTVSVDAVRKPERSSQALTLTADTVLPVAVQEDEARCSSSAATTATRSSSNSRAQLSSSASLSRSINATTLTEPKGGTAGVAASGTGRLERVRTVVRAGSVSARNVASRERGPREKFAATFAASSSFSSKVAAAASSASASSMDMGAVAGARGAHVRRQTSVSTASTSSVASDMLRAPPALASYSFVSSRAQMQRYIDQWRDRFEEDKNAYKEGGYLTVTPGRIVHSRYVLIQKLGWGEFSTVWLGYDTKHATLGRGLSQAFVAVKVAKCRSNVQEATRYEVSLLRYL---EARLPRHAAITNIIDCFDVRGEFGMHTCMVLPLCGPNLLSIIERMKADRSRRNAEDLRMIKEIVLSVLISLHEL-SELNVVHTDIKPENVLCSAVDSKLVNSMEKFCIYNQERSHMISVEDFKKSMAQQSTEQLVYLADFGLSALLEPPGSAQLWMSACSNVDASLLAPLMRCKKNFPVTRSGVVD--------NHRGTLIQTREYRAPEVLLGLDFTCTTDVWSVGCMTFELITGCFLMDPKRKTREPRDMDIEHLAMMMQILGPLPSEITSIRVRNNDYYDAIIQGTPVPKSGFRPPPEYLHRFVDRNGKFIYASRYHSYPRRNLEMELEPY-LGFREAQLAANFILSCLHSYDPKKRPSAKKLLSHQWLYGVGAASKEKTPSR
5MY8 Chain:A ((9-381))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQ--------GKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI-----IKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS------VN------------------EQYIRRLAAEATEWQR-----------------------------FLVNPLE--PKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDED--HIALIIELLGKVPRKL-------------IVAG------------KYSKEFFTKKGDLKHITKLK--PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI-PEKRATAAECLRHPWL--------------


General information:
TITO was launched using:
RESULT:

Template: 5MY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1719 -21070 -12.26 -61.97
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -12.26
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_5MY8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MY8-query.scw
PDB file : Tito_Scwrl_5MY8.pdb: