Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceKCNISILKDGKYFTQKQEIAGWTVKFHDLDGNYVGKCKNAHTYACTYVTCEDLAPGYSPGKSKDVVASGNVGSLGHD
3DNL Chain:H ((237-292))----------------------------------GPCTNVSTVQCTH--------GIRPVVSTQLLLNG--------


General information:
TITO was launched using:
RESULT:

Template: 3DNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 13 20 1.50 0.72
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain H : 0.60

3D Compatibility (PKB) : 1.50
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.223

(partial model without unconserved sides chains):
PDB file : Tito_3DNL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DNL-query.scw
PDB file : Tito_Scwrl_3DNL.pdb: