Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK
5CVN Chain:D ((21-96))MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 310 -39960 -128.90 -525.79
target 2D structure prediction score : 0.84
Monomeric hydrophicity matching model chain D : 0.85

3D Compatibility (PKB) : -128.90
2D Compatibility (Sec. Struct. Predict.) : 0.84
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_5CVN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CVN-query.scw
PDB file : Tito_Scwrl_5CVN.pdb: