Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWFHGTLSRVKAAQLVLAGGPRNHGLFVIRQSETRPGEYVLTFNFQGKAKASHLRLSLNGHGQCHVQHLWFQSVLDMLRHF
2HDX Chain:A ((11-88))WFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAK--HLRLSLNAAGQCRVQHLHFQSIFDMLEHF


General information:
TITO was launched using:
RESULT:

Template: 2HDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 281 -51942 -184.85 -665.92
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -184.85
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.720

(partial model without unconserved sides chains):
PDB file : Tito_2HDX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HDX-query.scw
PDB file : Tito_Scwrl_2HDX.pdb: