Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSLTGVSNPTTDSARLVLAEANKAFADDSLTEQGLRDILQTVKDAIASLESIKESQSATKDGGQTAGKETAGEDESANQTQEISQGIK
4Y99 Chain:B ((17-63))-----GKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEA-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Y99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 21 -955 -45.45 -20.31
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -45.45
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_4Y99.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Y99-query.scw
PDB file : Tito_Scwrl_4Y99.pdb: